NGS-sequencing (Illumina) as a tool for determining the genomic composition and taxonomic affiliation of species and interspecific hybrids on the example of Hordeeae grasses

УДК 582.542.1:581.961+577.21+575.174.015.3+575.86

  • E. O. Punina Komarov Botanical Institute Email: elizaveta_punina@mail.ru
  • E. M. Machs Komarov Botanical Institute Email: edw.mach@gmail.com
  • N.N. Nosov Komarov Botanical Institute Email: nnosov2004@mail.ru
  • A. A. Gnutikov Komarov Botanical Institute; Federal Research Center N. I. Vavilov All-Russian Institute of Plant Genetic Resources (VIR) Email: alexandr2911@yandex.ru
  • A. V. Rodionov Komarov Botanical Institute; St. Petersburg State University Email: avrodionov@mail.ru
Keywords: Allopolyploidy, interspecial hybridization, ITS1, molecular phylogeny, speciation, 35S rRNA genes

Abstract

The results of the study of intragenomic polymorphism of multicopy nuclear ITS1 DNA sequences in different representatives of the cereal genera of the tribe Hordeeae (Agropyron, Hordeum, Elytrigia, Elymus, Psathyrostachys, Leymus) and intergeneric hybrid x Leymotrigia by NGS (Illumina) are discussed. It is shown that this method can be a good tool for determining the genomic composition and origin of polyploid species and distant hybrids, as well as solving taxonomic questions about the genus and species status of objects.

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Published
2023-12-04
How to Cite
Punina E. O., Machs E. M., Nosov N., Gnutikov A. A., Rodionov A. V. NGS-sequencing (Illumina) as a tool for determining the genomic composition and taxonomic affiliation of species and interspecific hybrids on the example of Hordeeae grasses // Проблемы ботаники Южной Сибири и Монголии, 2023. Vol. 22, № 2. P. 276-286 DOI: 10.14258/pbssm.2023141. URL: http://journal.asu.ru/bpssm/article/view/pbssm.2023141.